org.jscience.biology
Class Codons

java.lang.Object
  org.jscience.biology.Codons

public class Codons
extends java.lang.Object

A class representing the codons (the transcription of a sequence of three amino acids) for all known species.

Field Summary

static Alphabet	ALTERNATIVE_YEAST_NUCLEAR DOCUMENT ME!
static Alphabet	ASCIDIAN_MITOCHONDRIAL DOCUMENT ME!
static Alphabet	BACTERIAL_AND_PLANT_PLASTID DOCUMENT ME!
static Alphabet	BLEPHARISMA_MACRONUCLEAR DOCUMENT ME!
static Alphabet	CHLOROPHYCEAN_MITOCHONDRIAL DOCUMENT ME!
static Alphabet	CILIATE_NUCLEAR DOCUMENT ME!
static Alphabet	ECHINODERM_MITOCHONDRIAL DOCUMENT ME!
static Alphabet	EUPLOTID_NUCLEAR DOCUMENT ME!
static Alphabet	FLATWORM_MITOCHONDRIAL DOCUMENT ME!
static Alphabet	INVERTEBRATE_MITOCHONDRIAL DOCUMENT ME!
static Alphabet	MOLD_MITOCHONDRIAL DOCUMENT ME!
static Alphabet	SCENEDESMUS_MITOCHONDRIAL DOCUMENT ME!
static Alphabet	STANDARD DOCUMENT ME!
static Alphabet	THRAUSTOCHYTRIUM_MITOCHONDRIAL DOCUMENT ME!
static Alphabet	TREMATODE_MITOCHONDRIAL DOCUMENT ME!
static Alphabet	VERTEBRATE_MITOCHONDRIAL DOCUMENT ME!
static Alphabet	YEAST_MITOCHONDRIAL DOCUMENT ME!

Constructor Summary

Codons()

Method Summary

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

STANDARD

public static final Alphabet STANDARD

DOCUMENT ME!

VERTEBRATE_MITOCHONDRIAL

public static final Alphabet VERTEBRATE_MITOCHONDRIAL

DOCUMENT ME!

YEAST_MITOCHONDRIAL

public static final Alphabet YEAST_MITOCHONDRIAL

DOCUMENT ME!

MOLD_MITOCHONDRIAL

public static final Alphabet MOLD_MITOCHONDRIAL

DOCUMENT ME!

INVERTEBRATE_MITOCHONDRIAL

public static final Alphabet INVERTEBRATE_MITOCHONDRIAL

DOCUMENT ME!

CILIATE_NUCLEAR

public static final Alphabet CILIATE_NUCLEAR

DOCUMENT ME!

ECHINODERM_MITOCHONDRIAL

public static final Alphabet ECHINODERM_MITOCHONDRIAL

DOCUMENT ME!

EUPLOTID_NUCLEAR

public static final Alphabet EUPLOTID_NUCLEAR

DOCUMENT ME!

BACTERIAL_AND_PLANT_PLASTID

public static final Alphabet BACTERIAL_AND_PLANT_PLASTID

DOCUMENT ME!

ALTERNATIVE_YEAST_NUCLEAR

public static final Alphabet ALTERNATIVE_YEAST_NUCLEAR

DOCUMENT ME!

ASCIDIAN_MITOCHONDRIAL

public static final Alphabet ASCIDIAN_MITOCHONDRIAL

DOCUMENT ME!

FLATWORM_MITOCHONDRIAL

public static final Alphabet FLATWORM_MITOCHONDRIAL

DOCUMENT ME!

BLEPHARISMA_MACRONUCLEAR

public static final Alphabet BLEPHARISMA_MACRONUCLEAR

DOCUMENT ME!

CHLOROPHYCEAN_MITOCHONDRIAL

public static final Alphabet CHLOROPHYCEAN_MITOCHONDRIAL

DOCUMENT ME!

TREMATODE_MITOCHONDRIAL

public static final Alphabet TREMATODE_MITOCHONDRIAL

DOCUMENT ME!

SCENEDESMUS_MITOCHONDRIAL

public static final Alphabet SCENEDESMUS_MITOCHONDRIAL

DOCUMENT ME!

THRAUSTOCHYTRIUM_MITOCHONDRIAL

public static final Alphabet THRAUSTOCHYTRIUM_MITOCHONDRIAL

DOCUMENT ME!

Constructor Detail

Codons

public Codons()